Bioinformatics concept dna protein letter.

What is the difference between a chromosome, a gene, a protein and DNA?

December 16, 2008

Bioinformatics concept dna protein letter.

A curious adult from California asks:

“So, what is the difference between a chromosome, a gene, a protein and DNA? I mean where do they all fit in?”

With words like these being bandied about willy-nilly, it isn't surprising that you are a bit confused by all of this. Here is a breakdown of what each means and how they relate.

DNA is the chemical that makes up your genetic code. DNA itself is made up of four simple chemical units that are abbreviated as A, G, C, and T. These letters are used to form three letter words that cells can read.

chromosome is simply a very long piece of DNA. Humans usually have 23 pairs of chromosomes. They are numbered 1-22 with the 23rd pair being either XX in girls or XY in boys.

gene is a stretch of DNA on a chromosome that has the instructions for making a product. Each chromosome has many genes with humans having over 22,000 genes in all.

protein is the product a gene makes. It is a molecular machine that does a specific job. Some proteins like amylase help us digest food. Others like opsins help us see colors. And still others like the globins help our blood take oxygen to and carbon dioxide away from our cells.

Beta Globin (Hemoglobin) as an example

Let's look at an example to make this all more concrete. (I will call “beta globin” by its more common name, hemoglobin.)

The hemoglobin gene (HBB) is located on chromosome 11.

This chromosome is a little less than 135 million DNA letters long. It has over 1500 different genes, one of which is HBB. Chromosome 11 is definitely one of the most gene-rich chromosomes we have.

The HBB gene is located near the middle of this chromosome. It is 1600 or so DNA letters long. The actual instructions for making the hemoglobin protein are only 444 letters. (The other letters are used to figure out when, where, and how much of the protein to make.)

A quick summary up to this point. Human DNA consists of around 3 billion DNA letters. Around 4.5% of this is chromosome 11. And around 0.000015% of human DNA has the instructions for hemoglobin.

Chromosome, genes, DNA, and proteins.
Image: MIT OpenCourseWare

The instructions for hemoglobin are written in the three letter words (or codons) I mentioned earlier. To understand how these codons work, I need to give a brief description of what a protein is.

Proteins are strings of amino acids stuck together. The number and particular order of the 20 different amino acids determines what a protein can do. Proteins can range anywhere from 34,350 amino acids in the muscle protein titin to less than 100 amino acids in proteins like insulin.

As I said, the instructions for putting a protein together are found in the codons of a gene. Each codon tells the cell which amino acid to add to the protein. You can see exactly what amino acid each codon makes in a chart like this one:

Codon chart.
The genetic alphabet has 4 letters. They can combine into 64 different three letter “words”.

For example, the 444 DNA letters of the HBB gene that tells the cell how to make hemoglobin starts out like this:


To make things easier, we'll split this up into three letter words:


Each of these codons tells a cell which amino acid to add. For example, an ATG tells the cell to add a methionine (or Met). So, like most other proteins, hemoglobin starts out with Met. Next comes a valine (Val), then a leucine (Leu), etc. When we keep adding amino acids we end up with the following:

Met-Val-Leu-Thr-Pro-Glu-Glu ...

This goes on for another 141 amino acids and you have hemoglobin.

Hemoglobin is a critical protein in our blood. It carries oxygen to and carbon dioxide away from cells. We need for the amino acids to be put together just right or we can end up with a disease. Like sickle cell anemia.

Sickle cell anemia is a disease that affects around 72,000 people in the U.S.  People with sickle cell anemia have a single difference in the 444 letters of their hemoglobin gene instructions. Their gene starts out with:


This means that their hemoglobin protein starts out with:

Met-Val-Leu-Thr-Pro-Val-Glu ...

This one difference is enough to cause sickle cell anemia! In other words, a difference of 1 out of 3 billion letters can cause the problems of sickle cell anemia. Similar small changes in other genes can cause problems like cystic fibrosis, dwarfism, etc.

So there you have it. Genes and chromosomes are made up of the 4 letters of DNA. And cells read the letters found in stretches of DNA called genes to make proteins that help our bodies and minds run properly.

Author, Dr. Barry Starr.

Author: Dr. D. Barry Starr

Barry served as The Tech Geneticist from 2002-2018. He founded Ask-a-Geneticist, answered thousands of questions submitted by people from all around the world, and oversaw and edited all articles published during his tenure. AAG is part of the Stanford at The Tech program, which brings Stanford scientists to The Tech to answer questions for this site, as well as to run science activities with visitors at The Tech Interactive in downtown San Jose.

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